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docker remove file from container permission denied
rev2022.8.2.42721. Whenever we crate a database, a directory is created under mysql/var/ ( XAMPP : XAMPP/xamppfiles/mysql/var/) with the same name as that of your database, this directory contains a file called db.opt which contains metadata related to the database. 2008 - 2022 by Claudio Kuenzler. For more information on the available settings, you can check out this page. Asking for help, clarification, or responding to other answers. More like San Francis-go (Ep. But as soon as john wants to delete a file, the user gets a permission denied: john@logserver:/log/dev$ rm app-dev-2022-02-09-10.log.gzrm: remove regular file 'app-dev-2022-02-09-10.log.gz'? Thanks for contributing an answer to Super User! But why? That's why the file permissions for others are there in the first place. No error this time, and the file is gone: john@logserver:/log/dev$ ls -latotal 624-rw-rw-rw- 1 logstash logstash 55433 Feb 9 12:38 app-dev-2022-02-09-11.log.gz-rw-rw-rw- 1 logstash logstash 6679 Feb 9 16:29 app-dev-2022-02-09-15.log.gz-rw-rw-rw- 1 logstash logstash 26099 Feb 9 17:18 app-dev-2022-02-09-16.log.gz-rw-rw-rw- 1 logstash logstash 12028 Feb 9 18:07 app-dev-2022-02-09-17.log.gz-rw-rw-rw- 1 logstash logstash 23340 Feb 9 19:53 app-dev-2022-02-09-18.log.gz-rw-rw-rw- 1 logstash logstash 62450 Feb 9 20:41 app-dev-2022-02-09-19.log.gz-rw-rw-rw- 1 logstash logstash 16791 Feb 10 10:55 app-dev-2022-02-10-09.log.gz-rw-rw-rw- 1 logstash logstash 317346 Feb 10 11:49 app-dev-2022-02-10-10.log-rw-rw-rw- 1 logstash logstash 94678 Feb 10 12:00 app-dev-2022-02-10-11.log, AWS Android Ansible Apache Apple Atlassian BSD Backup Bash Bluecoat CMS Chef Cloud Coding Consul Container Containers CouchDB DB DNS Database Databases Docker ELK Elasticsearch Filebeat FreeBSD Galera GlusterFS Grafana Graphics HAProxy HTML Hacks Hardware Icinga Icingaweb Icingaweb2 InfluxDB Internet Java KVM Kibana Kodi Kubernetes LXC Linux Logstash Mac Macintosh Mail MariaDB Minio MongoDB Monitoring Multimedia MySQL NFS Nagios Network Nginx OSSEC OTRS Office PGSQL PHP Perl Personal PostgreSQL Postgres PowerDNS Proxmox Proxy Python Rancher Rant Redis Roundcube SSL Samba Seafile Security Shell SmartOS Solaris Surveillance Systemd TLS Tomcat Ubuntu Unix VMWare VMware Varnish Virtualization Windows Wireless Wordpress Wyse ZFS Zoneminder. Do you have any clue on what am I missing? So I would guess that db.opt is connected to some running process. Why did the folks at Marvel Studios remove the character Death from the Infinity Saga? y. to change the ownership to guest? Running Tools->New Permissions tool can correct permissions. Pasted as rich text. To learn more, see our tips on writing great answers. Note: Your post will require moderator approval before it will be visible. Feel free to ping if that doesn't solve the issue! I mounted an ISO, but it mounts with 000 permissions, and as a result, I can only access it as root. privacy statement. There are two options: Now since the node user/group are specific to the node image and frontend container, you'll have to set the permissions by UID/GID (1000 in this case), so you could use a configuration that looks something like: You can also change the permission mode, but the default should be sufficient. Look at my edit for more details. Our local user "john" has access to the local /log/dev directory and can successfully list all the files in this path: john@logserver:/log/dev$ ls -latotal 748-rw-rw-rw- 1 logstash logstash 20932 Feb 9 11:55 app-dev-2022-02-09-10.log.gz-rw-rw-rw- 1 logstash logstash 55433 Feb 9 12:38 app-dev-2022-02-09-11.log.gz-rw-rw-rw- 1 logstash logstash 6679 Feb 9 16:29 app-dev-2022-02-09-15.log.gz-rw-rw-rw- 1 logstash logstash 26099 Feb 9 17:18 app-dev-2022-02-09-16.log.gz-rw-rw-rw- 1 logstash logstash 12028 Feb 9 18:07 app-dev-2022-02-09-17.log.gz-rw-rw-rw- 1 logstash logstash 23340 Feb 9 19:53 app-dev-2022-02-09-18.log.gz-rw-rw-rw- 1 logstash logstash 62450 Feb 9 20:41 app-dev-2022-02-09-19.log.gz-rw-rw-rw- 1 logstash logstash 122669 Feb 10 10:55 app-dev-2022-02-10-09.log-rw-rw-rw- 1 logstash logstash 317346 Feb 10 11:49 app-dev-2022-02-10-10.log-rw-rw-rw- 1 logstash logstash 94678 Feb 10 12:00 app-dev-2022-02-10-11.log. This folder is share with the host by a docker volume. Permission denied opening files on the container. So the issue is not really deleting db.opt as much as permissions for the parent directory that is somehow preventing MySQL from deleting its own table. By Why does the United States openly acknowledge targeted assassinations? Site design / logo 2022 Stack Exchange Inc; user contributions licensed under CC BY-SA. May 13, 2019 in General Support. I found the solution so if some one of you have this kind of issue. The best answers are voted up and rise to the top, Start here for a quick overview of the site, Detailed answers to any questions you might have, Discuss the workings and policies of this site, Learn more about Stack Overflow the company, as you see i am already root, thus sudo is not needed. Chi squared test with reasonable sample size results in R warning. There are some wrong answers which can be found on the Internet, including hints that "only the owner can delete files". Announcing the Stacks Editor Beta release! Hello, how are you? Sign in Lilypond: How to remove extra vertical space for piano "play with right hand" notation. Connect and share knowledge within a single location that is structured and easy to search. To learn more, see our tips on writing great answers. To delete a file or directory, the ownership and permissions are required. Can I create a custom user in all the images to use it for share the volumes? By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. Already on GitHub? What is the equivalent of the Run dialogue box in Windows for adding a printer? Possibly MySQL? How can I refill the toilet after the water has evaporated from disuse? Copyright 2005-2022 Lime Technology, Inc. How to remove file permissions from an external hard drive? Your frontend service is running as the node user, with UID (and corresponding GID) 1000, so it's not able to access the files in the volume. Making statements based on opinion; back them up with references or personal experience. How can I remove a file from a Docker image that shows permissions only as question marks, San Francisco? I would recommend stoping the MySQL service checking the ownership and permissions of the parent directory and getting them to match what MySQL requires and needs. You can post now and register later. @xenoscopic Thank you for those clarifications. More like San Francis-go (Ep. Once you make this change, you'll need to remove the existing volume since Mutagen won't overwrite the existing file permissions for files that it's not updating (meaning they'll remain with root ownership). What does the Ariane 5 rocket use to turn? I personally would also recommend you reinstall MySQL again to ensure that permissions are fixed. How can I force remove that file? Unraid is a registered trademark of Lime Technology, Inc. But knowing how Docker continuers work that might mean destroying and rebuilding the Docker image so hey Your choice. - is or was? @xenoscopic Thank you for the detailed response. Why classical mechanics is not able to explain the net magnetization in ferromagnets? Announcing the Stacks Editor Beta release! Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide. It doesn't matter whether this user is owner or part of the group ownership of the file in question. How can I make it accessible to a normal user? Making statements based on opinion; back them up with references or personal experience. I finnally change user of Redis in my supervisord conf to host, Managing file permissions in a docker setup, port forwarding in docker container in AWS EC2 linux machine, How can you have a docker image layer of a different operating system. Oscillating instrumentation amplifier with transformer coupled input. What is the rounding rule when the last digit is 5 in .NET? I tried to change php-fpm user from www-data to root in www.conf Sign up for a free GitHub account to open an issue and contact its maintainers and the community. By clicking Sign up for GitHub, you agree to our terms of service and Display as a link instead, Lake Irrigation System 220v & 110v needed at end of long run. Why must fermenting meat be kept cold, but not vegetables? 468), Monitoring data quality with Bigeye(Ep. Your previous content has been restored. I wanted to overwrite it but I have a permission denied as files are owned by User\nobody. That's bogus. yrm: cannot remove 'app-dev-2022-02-09-10.log.gz': Permission denied. I have an issue as I just migrated everything from Windows to Unraid: I migrated my plex/sonarr/radarr etc. Should I cook mushrooms on low or high heat in order to get the most flavour? Basically the user needs to have write permissions on the file. Asking for help, clarification, or responding to other answers. You can do this by bringing down the Compose project with the --volumes flag or by manually removing the volume with docker volume rm. I understand perfectly that. 0777/0666 instead of the default 0700/0600), or something similar with a different owner/group. Cannot remove: Permission denied to delete file on local Linux file system, even with write permissions. Meaning you should use sudo like this to force removal of the file via super user access: But in this case it seems like you are already logged in as root. I suppose that it means that I need to connect as logged user to delete them now? By looking at the permissions of the file's parent directory (/log/dev), we can see that "john" does not have write permissions: root@logserver:~# ls -la /log/total 64drwxrwxrwx 7 logstash root 4096 Feb 9 11:16 .drwxr-xr-x 20 root root 4096 Jan 17 15:55 ..drwxr-xr-x 2 logstash logstash 4096 Feb 10 13:10 devdrwx------ 2 root root 16384 Jan 17 15:56 lost+founddrwxr-xr-x 2 logstash logstash 4096 Feb 4 11:00 proddrwxr-xr-x 2 logstash logstash 12288 Feb 10 13:10 stagedrwxr-xr-x 2 logstash logstash 20480 Feb 10 13:10 test. I tried to rename a movie downloaded with Sonarr, same issue, I cannot mess with it, permission denied ! Trending sort is based off of the default sorting method by highest score but it boosts votes that have happened recently, helping to surface more up-to-date answers. Just out of curiosity to see if I could set permissions outside the root scope in a case like this. Meaning of 'glass that's with canary lined'? What are the possible attributes of aluminum-based blood? Restore formatting, If you have an account, sign in now to post with your account. Mimimizing a monomial function subject to inequality constraints. 468), Monitoring data quality with Bigeye(Ep. It only takes a minute to sign up. I tried to rename a movie downloaded with Sonarr, same issue, I cannot mess with it, permission denied ! Math Proofs - why are they important and how are they useful? Set them to be 0777. Is it really necessary considering the "wrong" position and normal behavior? How does JWST position itself to see and resolve an exact target? You signed in with another tab or window. (How) Can I switch from field X to field Y after getting my PhD? Yeah sure, because my php process worked as www-data and my container as root maybe that's the problem.. but I don't want to do a chown each time I create a file according to your link.. do you understand ? You can check out the permissions on files by dropping into a shell in the Mutagen sidecar container: Also, in this case I was able to determine the target UID/GID using this tool. It falls back to sorting by highest score if no posts are trending. Can my aliens develop their medical science, in spite of their strict ethics? You could do two volumes/sync sessions if it's just a little bit of code, or you could do a single volume with root ownership and more relaxed permissions (e.g. At 3% inflation rate is $100 today worth $40 20 years ago. @Lzok It's really something you need to evaluate on a case-by-case basis, unfortunately, and it's definitely one of the downsides of containerized development (vs. everything on your local system, where all processes and files have the same UID/GID). Why must fermenting meat be kept cold, but not vegetables? Is there a command (chown?) 469). What rating point advantage does playing White equate to? How to construct chords in exotic scales? I don't understand Dyson's argument for divergence of perturbative QED. Connect and share knowledge within a single location that is structured and easy to search. Have a question about this project? But even this is sometimes not enough, as the following example shows. Is it legal to download and run pirated abandonware because I'm curious about the software? Years of experience when hiring a car - would a motorbike license count? The link mean you can chown when you are create container, not each time.Maybe you can see again, San Francisco? In this case it's obvious which UID/GID are being used based on the commands, but it won't always be, so you can also look in /etc/shadow and /etc/group to grab the UID/GID if you know the user and group you're interested in (and you'll usually have to do that if it's a distro-provided user such as www-data). How to fit many graphs neatly into a paper? In general terms, I always prefer to run all my things as non-root, so it's nice to see that I can even if I have to write some extra lines. Cannot delete any files created by Docker application - Need permission from User\nobody. And, of course, it's possible that both containers have a different default user but that both use the same UID/GID for that user (typically 1000), so in that case you'd probably want to use 1000 as the owning user/group, even though it means different users/groups to different containers. As explained in this article here: If you get this error message when you are tying to drop a MySQL database say my_database then the reason for this is File Permissions (Error code 13). By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. When I upload my queue create files and folders into /var/www/storage/app/public (laravel container). By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. Thanks for contributing an answer to Stack Overflow! Super User is a question and answer site for computer enthusiasts and power users. You cannot paste images directly. I have a nginx, laravel, and redis containers. I have issue removing files on a Docker image. How do I politely refuse/cut-off a person who needs me only when they want something? Well occasionally send you account related emails. Years of experience when hiring a car - would a motorbike license count? What is the gravitational force acting on a massless body? to it, but as I am migrating my data I saw that Sonarr had already recreated folders and some files (meta data) for each tv show. The text was updated successfully, but these errors were encountered: Mutagen will operate as root inside the Mutagen sidecar service, so any files it creates will default to root ownership and access. Typically if there are question marls like that for permissions and ownership, that means that the permissions are above your current users default permissions. Within Sonarr's advanced settings, you can have it set file / folder permissions. It "is/was" crazy that he did not attend school for a whole month. How to use jq to return information to the shell, taking whitespace into account? Upload or insert images from URL. I am having troubles with permissions on my container. Which approach could be the better one in a case like this? To subscribe to this RSS feed, copy and paste this URL into your RSS reader. yendi, Although the file permissions are enough for john to delete the file, there is one more thing to consider: The parent directory. rev2022.8.2.42721. Stack Exchange network consists of 181 Q&A communities including Stack Overflow, the largest, most trusted online community for developers to learn, share their knowledge, and build their careers. The write permissions are given, as all these files have read-write permissions for owner, group and others (chmod 666). On this StackExchange question, user jsbillings describes such a situation very well: Deleting a file means you are making changes to the directory it resides in. If you are using docker you want the docker safe version of this tool that is installed by the Fix Common Problems plugin to avoid changing the permissions in the appdata share (which can upset docker containers). Powered by . What is the music theory related to a bass progression of descending augmented 4th from ^7 to ^4? 469). To subscribe to this RSS feed, copy and paste this URL into your RSS reader. Your link has been automatically embedded. After this ownership and permission change on the parent directory, user "john" can try to delete the file within /log/dev again: john@logserver:/log/dev$ rm app-dev-2022-02-09-10.log.gzrm: remove regular file 'app-dev-2022-02-09-10.log.gz'? How do I politely refuse/cut-off a person who needs me only when they want something? Clear editor. KNN: Should we randomly pick "folds" in RandomizedSearchCV? I am trying to remove the file db.opt but getting a message that this file doesn't exist and I see its permission as question marks. @isb Fair enough. I tried and it worked like a charm. By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. I have created hundreds of files everywhere. to match the user conf of php fpm (so www-data instead of root), I understand your cant remove files or folder in container, maybe you can see: Can't Delete file created via Docker. Why does sdk expression need to be by the end of the bash_profile file? Site design / logo 2022 Stack Exchange Inc; user contributions licensed under CC BY-SA. Trying to relate microphone sensitivity and SPL. Published on February 10th 2022 - Listed in Linux Unix. Is Pelosi's trip to Taiwan an "official" or "unofficial" visit? Let's adjust this a bit. Only the logstash user (directory owner) is allowed to write/modify the dev directory. I have one question left from this comment of yours: Now since the node user/group are specific to the node image and frontend container, you'll have to set the permissions by UID/GID (1000 in this case) []. The command I am using is mutagen-compose up. If I write this command in the parent folder, will it make the file/folder deletable by everyone? We change the group ownership to john (or another group, user john is a member of) and set the write permissions for the group (chmod 775), too: root@logserver:~# chown logstash:john /log/devroot@logserver:~# chmod 775 /log/devroot@logserver:~# ls -la /log/total 64drwxrwxrwx 7 logstash root 4096 Feb 9 11:16 .drwxr-xr-x 20 root root 4096 Jan 17 15:55 ..drwxrwxr-x 2 logstash john 4096 Feb 10 13:10 devdrwx------ 2 root root 16384 Jan 17 15:56 lost+founddrwxr-xr-x 2 logstash logstash 4096 Feb 4 11:00 proddrwxr-xr-x 2 logstash logstash 12288 Feb 10 13:10 stagedrwxr-xr-x 2 logstash logstash 20480 Feb 10 13:10 test. Announcing Design Accessibility Updates on SO, Unable to connect to unix:///var/run/docker.sock (Permission denied) from PHP code, Class Not Found Calling a Laravel Script from Supervisord, denied: requested access to the resource is denied: docker, ERROR (no such file) nginx + uwsgi + supervisor + Django, How to fix docker: Got permission denied issue, Laravel Framework/sessions failed to open stream: Permission denied, exec: "php-fpm": executable file not found in $PATH: unknown. It's a NextJS project that works fine with docker-compose on Mac but well, due to the poor performance of volumes on Mac, I'm trying Mutagen. I tried to launch supervisord queue process and fpm as root user. Edit: In the same docker-compose file I have the backend service, using other mutagen volume and it works ok. How to expose Linux socket file from Docker container (MySQL, MariaDB, etc.) Ansible error Could not find or access on Ansible Controller. Find centralized, trusted content and collaborate around the technologies you use most. If not, then just run a chmod 777 on the parent directory, restart MySQL and then run the DROP DATABASE
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